RetrogeneDB ID: | retro_ttru_1470 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_114144:90218..90580(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTTRG00000016447 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 59.02 % |
Parental protein coverage: | 96.8 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW |
A......KK..SAI..V.TR.Y...IH..IH.VGFKK..P.AL.EI.KFAMKEMGTPDV...TRLNKAVW | |
Retrocopy | ARRMAQAKKNGSAIKGVETRRYILDIHQLIHEVGFKKWGPQALREIWKFAMKEMGTPDVHFHTRLNKAVW |
Parental | AKGI-RNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDE |
AKGI.RN.PY...V.LSRK.N.DEDSPNK....V.Y..........T.NVDE | |
Retrocopy | AKGI<RNIPYCFHVWLSRKCNDDEDSPNKQALYVGYLRTYHYCQRSTANVDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |