RetrogeneDB ID: | retro_ttru_40 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1009:92366..92728(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTTRG00000016447 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 63.49 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
MAPAK.GG..KKG.S.INEV.TREY.INI.K.IHGVGF.K..P..LKEI..FAMKEMG.....IDTR.N. | |
Retrocopy | MAPAKNGG--KKGLSTINEVATREYCINIPKHIHGVGF*KCVPCTLKEIWEFAMKEMGMSVAHIDTRVNI |
Parental | AVWAKGIRNVP-YRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
.VWAKGIRN.......V.L.R...ED..S.N..YT..TYVPVT..K.LQTVNVDEN | |
Retrocopy | TVWAKGIRNIS<LDVSV*LFRNEVED--SANNFYTFLTYVPVTI*KTLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |