RetrogeneDB ID: | retro_dord_515 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_2523:59907..60263(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Rpl31 | ||
Ensembl ID: | ENSDORG00000015728 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:MGI Symbol;Acc:MGI:2149632] |
Percent Identity: | 87.5 % |
Parental protein coverage: | 95.2 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
MAPAKKGGEKKKGR.AIN.VVT.EYTINIH.RIHGVGFKKRAPRALKEI.KFA.K.MGTPD.RIDTRLNK | |
Retrocopy | MAPAKKGGEKKKGRCAINKVVTCEYTINIHQRIHGVGFKKRAPRALKEIQKFAVKKMGTPDMRIDTRLNK |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYV-PVTTFKNLQT |
AVWAKGIRNV.Y.I.V.LSR.RNEDEDSPNKLY.LVTYV.PVTTFKNLQT | |
Retrocopy | AVWAKGIRNVHYWICVPLSRNRNEDEDSPNKLYALVTYV<PVTTFKNLQT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |