RetrogeneDB ID: | retro_pvam_1026 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_2331:104963..105223(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL12 | ||
Ensembl ID: | ENSPVAG00000000925 | ||
Aliases: | None | ||
Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
Percent Identity: | 73.86 % |
Parental protein coverage: | 51.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | ALAPKIGPLGLSPKKV-GDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKK- |
A.APK..PL.LSPK...GDDIAKA.G..KGLRITVK.TIQNRQAQI.VVPSASALIIKALKE..RDRKK. | |
Retrocopy | APAPKVRPLSLSPKTA<GDDIAKASGV*KGLRITVKPTIQNRQAQIKVVPSASALIIKALKELQRDRKKX |
Parental | -QKNIKHSGNITFDEIVN |
....IKHSGN..FDE.V. | |
Retrocopy | XXXXIKHSGNTIFDETVD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |