RetrogeneDB ID: | retro_tsyr_1256 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_36672:245..1131(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MKRN1 | ||
Ensembl ID: | ENSTSYG00000009996 | ||
Aliases: | None | ||
Description: | makorin ring finger protein 1 [Source:HGNC Symbol;Acc:7112] |
Percent Identity: | 65.35 % |
Parental protein coverage: | 71.36 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 4 |
Parental | APSCTEAPLQGSVTKEESE-KEQPAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPMDAAQ |
APSCTEA.LQG.V.KEESE.K..P.........P.........GE.C..L..DS..MCGL.VL.P.DAA. | |
Retrocopy | APSCTEATLQG*VIKEESE>KSNPLQK*TSSFAPCCSG*VPMWGELCESLNRDSHAMCGLRVLQPTDAAP |
Parental | RSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAK |
RSQH..S.IEAHEKD..LS...........G...........PS.R.FG..SNC..T.CLK.I.K.R.AK | |
Retrocopy | RSQHM*SYIEAHEKDRKLSLLCSAARTWCVGSAWR--WSTRKPSQRHFGMPSNCSRTHCLKRIHKRRRAK |
Parental | QFESKIIKSCPECRITSNF-VIPSEYWVEEKEEKQKLIQKYKEAMSNKACRYFD-EGRG-SCPFGGNCFY |
QFESKI.KS.PEC..TSNF..IPSEYWVEEKE.KQKLIQKY.EAMSNK.CRYF..EG.G.SCPFGGN.F. | |
Retrocopy | QFESKIVKSRPECWVTSNF<FIPSEYWVEEKE-KQKLIQKYEEAMSNKTCRYFM<EGCG<SCPFGGNGFC |
Parental | KHAYPDGRREEPQTQKVGTSSRYRAQRRNHFWELIEERENSIPFDTDEEVVTFELGEMLLMLLAAGGDDE |
KH.YPDGRRE.PQTQKVGTSSR..AQ.RNHFWELIEERENSI.FDT.EEVVTFEL..MLLMLLA.G...E | |
Retrocopy | KHVYPDGRREKPQTQKVGTSSRDWAQQRNHFWELIEERENSILFDTSEEVVTFELNKMLLMLLAVGSNNE |
Parental | LTDSEDEWDLFHDELEDFYDLDL |
LTDSED.W..FHDELEDFYDL.L | |
Retrocopy | LTDSEDKWNSFHDELEDFYDLNL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |