RetrogeneDB ID: | retro_tsyr_1525 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_47865:3370..4041(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MKRN1 | ||
Ensembl ID: | ENSTSYG00000009996 | ||
Aliases: | None | ||
Description: | makorin ring finger protein 1 [Source:HGNC Symbol;Acc:7112] |
Percent Identity: | 94.22 % |
Parental protein coverage: | 53.46 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERR-FGILSNCNHTYCLKCIRKWRSAKQFESK |
S..EA.EKDMELSFAVQRSKDMVCGICMEVV.EKANPSE.R.FGILSNCNHTY.LKCIRKWRSAKQFESK | |
Retrocopy | SYFEAREKDMELSFAVQRSKDMVCGICMEVVCEKANPSEGR<FGILSNCNHTYRLKCIRKWRSAKQFESK |
Parental | IIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGR |
IIKSCPEC.ITSN.VIPSEYWVEEKEEKQKLIQKYKEAMSNKACRYFDEG.GSCPFG.NCFYKHA.PDGR | |
Retrocopy | IIKSCPECWITSNLVIPSEYWVEEKEEKQKLIQKYKEAMSNKACRYFDEGCGSCPFGRNCFYKHASPDGR |
Parental | REEPQTQKVGTSSRYRAQRRNHFWELIEERENSIPFDTDEEVVTFELGEMLLMLLAAGGDDELTDSEDEW |
REEPQTQKVGTSSRYRAQRRNHFWE.IEERENSIPFDTDEEVVTFELGEMLLMLLAAGGDDELTDSEDEW | |
Retrocopy | REEPQTQKVGTSSRYRAQRRNHFWEFIEERENSIPFDTDEEVVTFELGEMLLMLLAAGGDDELTDSEDEW |
Parental | DLFHDELEDFYDLDL |
DLFHDELEDFYDLDL | |
Retrocopy | DLFHDELEDFYDLDL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |