Parental gene: | PCNP, ENSCHOG00000007972 |
| Aliases: | None |
| Description: | PEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:30023] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_879:7013..23575(+) |
>ENSCHOG00000007972
CCTGAAGAAGAAGCAGAAAAACCTGTGAAAACTAAGACTGTTTCTTCCAGTAATGGAGGGGAAAGTTCCAGTCGCAGCGC
TGAGAAACGATCAGCTGAAGAAGAAGCTGGTGACCTCCCAACAAAGCCTACAAAGATCTCCAAGTTTGGATTTGCCATAG
GTAGTCAGATGACAAAGAAAGCATCAGCCATATCCATCAAACTTGGATNNNNNAAGCCTAAAGAAACTGTTGCAACTCTT
GCTCCAAAAACCCTTTCAGTAGCAGCAGCTTTTAATGAAGATGAAGATAGTGAGCCAGAGGAAATGCCTCCAGAAGCAAA
GATGAGGATGAAGAATATTGGAAGGGATACACCAACATCAGCAGGACCAAATTCCTTCAACAAAGGAAAGCATGGGTTTT
CTGATAACCAGAAGCTATGGGAGCGAAATATAAAATCTCACCTTGGAAATGTCCATGACCAAGACAATTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003777 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000009593 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000000508 | ortholog_one2many | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000010610 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000008873 | ortholog_one2one | 5 retrogenes | |
| Felis catus | ENSFCAG00000029026 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000081154 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000025423 | ortholog_one2many | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000005518 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000008072 | ortholog_one2one | 10 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005878 | ortholog_one2one | 5 retrogenes | |
| Macaca mulatta | ENSMMUG00000017782 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011696 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000071533 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003224 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011110 | ortholog_one2many | 7 retrogenes | |
| Otolemur garnettii | ENSOGAG00000001821 | ortholog_one2one | 4 retrogenes | |
| Procavia capensis | ENSPCAG00000007007 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000013591 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000015172 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000009886 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000028411 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000001433 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000011955 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015008 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000012239 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_594 | 84.71 | 100.00 | Please wait, loading  |
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| 2. | retro_chof_651 | 59.49 | 100.00 | Please wait, loading |
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| 3. | retro_chof_806 | 81.40 | 54.49 | Please wait, loading |
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| 4. | retro_chof_819 | 83.47 | 76.92 | Please wait, loading |
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| 5. | retro_chof_1170 | 85.71 | 89.74 | Please wait, loading |
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| 6. | retro_chof_1215 | 81.40 | 54.49 | Please wait, loading |
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| 7. | retro_chof_2070 | 91.43 | 89.74 | Please wait, loading |
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| 8. | retro_chof_2280 | 94.87 | 100.00 | Please wait, loading |
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| 9. | retro_chof_2290 | 85.06 | 98.08 | Please wait, loading |
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| 10. | retro_chof_2553 | 84.81 | 100.00 | Please wait, loading |
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| 11. | retro_chof_2575 | 77.78 | 74.36 | Please wait, loading |
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Download FASTA sequences of all ENSCHOG00000007972 retrocopies