RetrogeneDB ID: | retro_chof_1170 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_217715:3810..4224(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PCNP | ||
Ensembl ID: | ENSCHOG00000007972 | ||
Aliases: | None | ||
Description: | PEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:30023] |
Percent Identity: | 85.71 % |
Parental protein coverage: | 89.74 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SNGGESSSRSAEKRSAEEEAGDLPTKPTKISKFGFAIGSQMTKKASAISIKLGXXKPKETVATLAPKTLS |
S.GGESSSR.AEKRSAEE.AGDLPTKPTKISKFGFAIGSQMTK.AS..SIKLG..KPKETV.TLAPKTLS | |
Retrocopy | STGGESSSRNAEKRSAEEVAGDLPTKPTKISKFGFAIGSQMTKQASVTSIKLGSSKPKETVPTLAPKTLS |
Parental | VAAAFNEDEDSEPEEMPPEAKMRMKNIGRDTPTSAGPNSFNKGKHGFSDNQKLWERNIKSHLGNVHDQDN |
VAA.FN..ED.EPEEMPPE.KMRMKN.GRDTP.SAG.NSFNKGKHGF.DNQKLWE.NI.SHLGNVHDQDN | |
Retrocopy | VAADFN--EDGEPEEMPPEPKMRMKNTGRDTPVSAGRNSFNKGKHGFFDNQKLWEQNINSHLGNVHDQDN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |