Parental gene: | DUXA, ENSG00000258873 |
| Aliases: | None |
| Description: | double homeobox A [Source:HGNC Symbol;Acc:32179] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 19:57665388..57678811(-) |
>ENSG00000258873
ATGGCCGAAGACACCTATTCACACAAGATGGTAAAAACAAATCATAGGCGCTGTCGCACAAAATTCACAGAAGAACAGTT
GAAAATCCTCATCAATACCTTCAATCAAAAGCCTTACCCAGGTTATGCTACCAAACAAAAACTTGCTTTAGAAATCAATA
CAGAAGAGTCCAGAATCCAGATTTGGTTTCAGAATCGAAGAGCTAGGCACGGATTCCAGAAAAGACCAGAAGCTGAGACT
TTAGAATCAAGCCAGAGCCAGGGGCAAGATCAACCTGGTGTGGAGTTTCAAAGTAGAGAAGCCAGACGGTGTCGTACCAC
CTACAGCGCCTCTCAGTTACACACTCTCATCAAGGCATTTATGAAAAACCCATATCCTGGGATTGATTCCAGAGAAGAAC
TTGCTAAAGAAATCGGTGTTCCAGAGTCAAGAGTCCAAATTTGGTTCCAAAATCGAAGATCTAGATTACTTCTCCAGAGA
AAAAGGGAACCTGTGGCGTCCTTAGAACAAGAAGAGCAGGGCAAGATTCCTGAGGGACTGCAAGGTGCAGAAGATACACA
AAATGGCACCAACTTCACTAGTGACTCTCATTTCTCTGGAGCCAGAACGTGGTGA
ATGGCCGAAGACACCTATTCACACAAGATGGTAAAAACAAATCATAGGCGCTGTCGCACAAAATTCACAGAAGAACAGTT
GAAAATCCTCATCAATACCTTCAATCAAAAGCCTTACCCAGGTTATGCTACCAAACAAAAACTTGCTTTAGAAATCAATA
CAGAAGAGTCCAGAATCCAGATTTGGTTTCAGAATCGAAGAGCTAGGCACGGATTCCAGAAAAGACCAGAAGCTGAGACT
TTAGAATCAAGCCAGAGCCAGGGGCAAGATCAACCTGGTGTGGAGTTTCAAAGTAGAGAAGCCAGACGGTGTCGTACCAC
CTACAGCGCCTCTCAGTTACACACTCTCATCAAGGCATTTATGAAAAACCCATATCCTGGGATTGATTCCAGAGAAGAAC
TTGCTAAAGAAATCGGTGTTCCAGAGTCAAGAGTCCAAATTTGGTTCCAAAATCGAAGATCTAGATTACTTCTCCAGAGA
AAAAGGGAACCTGTGGCGTCCTTAGAACAAGAAGAGCAGGGCAAGATTCCTGAGGGACTGCAAGGTGCAGAAGATACACA
AAATGGCACCAACTTCACTAGTGACTCTCATTTCTCTGGAGCCAGAACGTGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 0 .00 RPM |
| bodymap2_lung | 0 .00 RPM |
| bodymap2_breast | 0 .00 RPM |
| bodymap2_adipose | 0 .04 RPM |
| bodymap2_adrenal | 0 .00 RPM |
| bodymap2_skeletal_muscle | 0 .00 RPM |
| bodymap2_thyroid | 0 .00 RPM |
| bodymap2_prostate | 0 .00 RPM |
| bodymap2_colon | 0 .00 RPM |
| bodymap2_testis | 0 .02 RPM |
| bodymap2_brain | 0 .00 RPM |
| bodymap2_heart | 0 .04 RPM |
| bodymap2_white_blood_cells | 0 .00 RPM |
| bodymap2_lymph_node | 0 .15 RPM |
| bodymap2_ovary | 0 .00 RPM |
| bodymap2_kidney | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000025505 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000007545 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005650 | ortholog_one2one | 7 retrogenes | |
| Loxodonta africana | ENSLAFG00000030167 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007788 | ortholog_one2one | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010886 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011331 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010457 | ortholog_one2one | 8 retrogenes | |
| Pan troglodytes | ENSPTRG00000028871 | ortholog_one2one | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000003020 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005321 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000014223 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014200 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_566 | 83.17 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_663 | 77.95 | 61.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1525 | 80.49 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_2454 | 69.93 | 69.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_4100 | 76.10 | 99.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000258873 retrocopies