Parental gene: | DUXA, ENSPTRG00000028871 |
| Aliases: | None |
| Description: | double homeobox A [Source:HGNC Symbol;Acc:32179] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:62196966..62210327(-) |
>ENSPTRG00000028871
ATGGCCGAAGACACCTATTCACACAAGATGGTAAAAACAAATCATAGGCGCTGTCGCACAAAATTCACAGAAGAACAGTT
GAAAATCCTCATCAATACCTTCAATCAAAAGCCTTACCCAGGTTATGCTACCAAACAAAAACTTGCTTTAGAAATCAATA
CAGAAGAGTCCAGAATCCAGATTTGGTTTCAGAATCGAAGAGCTAGGCACGGATTCCAGAAAAGACCAGAAGCTGAGACT
TTAGAATCAAGCCAGAGCCAGGGGCAAGATCAACCTGGTGTGGAGTTTCCAAGTAGAGAAGCCAGACGGTGTCGTACCAC
CTACAGCGCCTCTCAGTTACACACTCTCATCAAGGCATTTATGAAAAACCCATATCCTGGGATTGATTCCAGAGAAGAAC
TTGCTAAAGAAATCGGTGTTCCAGAGTCAAGAGTCCAGATTTGGTTCCAAAATCGAAGATCTAGATTACTTCTCCAGAGA
AAAAGGGAACCTGTGGCGTCCTTAGAACAAGAAGAGCAGGGCAAGATTCCTGAGGGACTGCAAGGTGCAGAAGATACACA
AAATGGCACCAACTTCACTAGTGACTCCCATTTCTCTGAAGCCAGAACGTGGTGA
ATGGCCGAAGACACCTATTCACACAAGATGGTAAAAACAAATCATAGGCGCTGTCGCACAAAATTCACAGAAGAACAGTT
GAAAATCCTCATCAATACCTTCAATCAAAAGCCTTACCCAGGTTATGCTACCAAACAAAAACTTGCTTTAGAAATCAATA
CAGAAGAGTCCAGAATCCAGATTTGGTTTCAGAATCGAAGAGCTAGGCACGGATTCCAGAAAAGACCAGAAGCTGAGACT
TTAGAATCAAGCCAGAGCCAGGGGCAAGATCAACCTGGTGTGGAGTTTCCAAGTAGAGAAGCCAGACGGTGTCGTACCAC
CTACAGCGCCTCTCAGTTACACACTCTCATCAAGGCATTTATGAAAAACCCATATCCTGGGATTGATTCCAGAGAAGAAC
TTGCTAAAGAAATCGGTGTTCCAGAGTCAAGAGTCCAGATTTGGTTCCAAAATCGAAGATCTAGATTACTTCTCCAGAGA
AAAAGGGAACCTGTGGCGTCCTTAGAACAAGAAGAGCAGGGCAAGATTCCTGAGGGACTGCAAGGTGCAGAAGATACACA
AAATGGCACCAACTTCACTAGTGACTCCCATTTCTCTGAAGCCAGAACGTGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000025505 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000007545 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000258873 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005650 | ortholog_one2one | 7 retrogenes | |
| Loxodonta africana | ENSLAFG00000030167 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007788 | ortholog_one2one | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010886 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011331 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010457 | ortholog_one2one | 8 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000003020 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005321 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000014223 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014200 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_424 | 83.17 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_482 | 79.53 | 61.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1034 | 80.98 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1418 | 69.23 | 69.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2781 | 78.05 | 99.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000028871 retrocopies