Parental gene:

Ndufaf4, ENSMUSG00000028261

Aliases:Ndufaf4, 1110007M04Rik, 3000003G13Rik, AW214064
Description:NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 [Source:MGI Symbol;Acc:MGI:1915743]
Organism:Mouse (Mus musculus)
Coordinates:4:24898082..24905001(+)


>ENSMUSG00000028261
ATGGGGGCTCGCGTGACCCGCGCCTTAAGGAACTTCAACGTGGAGAAGCGAGCGGAGCGAGAGATCAGCAAGAGGAAGCC
CTCCATGGCACCCAAGCACCCTTCTACCCGCGACCTCCTGCAGGAGCACCGGAGTCAGTATCCAGAAATCGAAGAAGTTG
TTTCTAAAAAAGATAACAAGCTGCTGTCATTGCTAAGAGATGTATATGTCGATTCCAAAGATCCGGTGCCTGCCTTGCCG
GTAAAAGTTGAACCACGACAAGAACCAAAGGAATTCAGACTGCCGATAGGAAATCACTTTGATAAGAATATCACGGACAT
TCCCAAAGGCAAGATTACTGTTGTAGAGGCATTGACCCTTCTCAATAACCATAAACTCTCTCCAGAAACATGGACTGCTG
AGAAAATCGCTCAAGAGTACTATTTAGAACTGAAGGATGTAAATTCCCTTCTCAAATATTTTGTTACTTTTGAAGTCAAA
ATCTTACCTCCAGAAGACAGGAAAGCAATACAATCAAAATGA

Library Parental gene expression (RPM)
SRP007412_brain 24 .95 RPM
SRP007412_cerebellum 18 .58 RPM
SRP007412_heart 39 .22 RPM
SRP007412_kidney 30 .09 RPM
SRP007412_liver 24 .77 RPM
SRP007412_testis 2 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003174 ortholog_one2one 1 retrogene
retro_btau_1763,
Choloepus hoffmanni ENSCHOG00000005145 ortholog_one2one 2 retrogenes
retro_chof_2271, retro_chof_891,
Callithrix jacchus ENSCJAG00000001235 ortholog_one2many 2 retrogenes
retro_cjac_1613, retro_cjac_1700,
Cavia porcellus ENSCPOG00000007618 ortholog_one2one 1 retrogene
retro_cpor_425,
Homo sapiens ENSG00000123545 ortholog_one2one 4 retrogenes
retro_hsap_1494, retro_hsap_2774, retro_hsap_3761, retro_hsap_477,
Gorilla gorilla ENSGGOG00000012070 ortholog_one2one 4 retrogenes
retro_ggor_1147, retro_ggor_1931, retro_ggor_2529, retro_ggor_451,
Microcebus murinus ENSMICG00000015734 ortholog_one2one 1 retrogene
retro_mmur_1624,
Macaca mulatta ENSMMUG00000018843 ortholog_one2one 4 retrogenes
retro_mmul_1717, retro_mmul_2138, retro_mmul_578, retro_mmul_734,
Nomascus leucogenys ENSNLEG00000013568 ortholog_one2one 4 retrogenes
retro_nleu_171, retro_nleu_1716, retro_nleu_678, retro_nleu_890,
Oryctolagus cuniculus ENSOCUG00000002152 ortholog_one2one 1 retrogene
retro_ocun_1162,
Pongo abelii ENSPPYG00000016857 ortholog_one2one 4 retrogenes
retro_pabe_1244, retro_pabe_2241, retro_pabe_257, retro_pabe_3160,
Pan troglodytes ENSPTRG00000018435 ortholog_one2one 4 retrogenes
retro_ptro_1013, retro_ptro_1877, retro_ptro_2552, retro_ptro_358,
Rattus norvegicus ENSRNOG00000007506 ortholog_one2many 3 retrogenes
retro_rnor_1617, retro_rnor_2973, retro_rnor_675,
Tursiops truncatus ENSTTRG00000010911 ortholog_one2one 1 retrogene
retro_ttru_628,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1153 76.42 59.54
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2. retro_mmus_1290 52.38 82.08
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3. retro_mmus_3668 72.78 88.44
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Download FASTA sequences of all ENSMUSG00000028261 retrocopies