Parental gene: | NDUFAF4, ENSPPYG00000016857 |
| Aliases: | NDUFAF4, HRPAP20 |
| Description: | NADH dehydrogenase [Source:RefSeq peptide;Acc:NP_001126910] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 6:98321241..98331640(-) |
>ENSPPYG00000016857
ATGGGAGCCCTAGTGATTCGCGGTATCAGGAATTTCAACCTAGAGAACCGAGCGGAACGTGAAATCAGCAAGATGAAGCC
CTCTGTCGCTCCCAGACACCCCTCTACCAACAGCCTCCTGCGAGAGCAGATTAGTCTCTATCCAGAAGTTAAAGGAGAGA
TTGCTCGTAAAGATAACAAGCTGCTGTCGTTACTAAAAGATGTGTATGTTGATTCCAAAGATCCTGTGCCTTCCTTGCAG
GTACAAGCTGCTGAAACATGTCAAGAGCCGAAGGAATTCAGATTGCCGAAAGACCATCACCTTGATATGATAAATACTAA
GAGCATTCCCAAAGGCAAAATTTCCATTACAGAAGCATTGTCACTTCTCAATAATCATAAGCTTTTCCCAGAAACCTGGA
CTGCTGAGAAAATAGCGCAAGAATACCAGTTAGAACAGAAAGATGTGAATTCTCTTCTTAAATATTTTGCTACTTTTGAA
GTCGAAATCTTCCCTCCTGAAGACACGAAAGCAATACAATCAAAATGA
ATGGGAGCCCTAGTGATTCGCGGTATCAGGAATTTCAACCTAGAGAACCGAGCGGAACGTGAAATCAGCAAGATGAAGCC
CTCTGTCGCTCCCAGACACCCCTCTACCAACAGCCTCCTGCGAGAGCAGATTAGTCTCTATCCAGAAGTTAAAGGAGAGA
TTGCTCGTAAAGATAACAAGCTGCTGTCGTTACTAAAAGATGTGTATGTTGATTCCAAAGATCCTGTGCCTTCCTTGCAG
GTACAAGCTGCTGAAACATGTCAAGAGCCGAAGGAATTCAGATTGCCGAAAGACCATCACCTTGATATGATAAATACTAA
GAGCATTCCCAAAGGCAAAATTTCCATTACAGAAGCATTGTCACTTCTCAATAATCATAAGCTTTTCCCAGAAACCTGGA
CTGCTGAGAAAATAGCGCAAGAATACCAGTTAGAACAGAAAGATGTGAATTCTCTTCTTAAATATTTTGCTACTTTTGAA
GTCGAAATCTTCCCTCCTGAAGACACGAAAGCAATACAATCAAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 27 .37 RPM |
| SRP007412_cerebellum | 20 .19 RPM |
| SRP007412_heart | 17 .16 RPM |
| SRP007412_kidney | 11 .87 RPM |
| SRP007412_liver | 14 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000003174 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005145 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001235 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000007618 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000123545 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012070 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000015734 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018843 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000028261 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013568 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002152 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018435 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000007506 | ortholog_one2many | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000010911 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_257 | 76.92 | 89.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1244 | 81.37 | 92.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2241 | 78.41 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_3160 | 77.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000016857 retrocopies