Parental gene: | NDUFAF4, ENSPTRG00000018435 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 6:97767714..97776375(-) |
>ENSPTRG00000018435
ATGGGAGCACTAGTGATTCGCGGTATCAGGAATTTCAACCTAGAGAACCGAGCGGAACGGGAAATCAGCAAGATGAAGCC
CTCTGTCGCTCCCAGACACCCCTCTACCAACAGCCTCCTGCGAGAGCAGATTAGTCTCTATCCAGAAGTTAAAGGAGAGA
TTGCTTGTAAAGATGAAAAGCTGCTGTCGTTTCTAAAAGATGTGTATGTTGATTCCAAAGATCCTGTGTCTTCCTTGCAG
GTAAAAGCTGCTGAAACATGTCAAGAGCCGAAGGAATTCAGATTGCCAAAAGACCATCACTTTGATATGATAAATATTAA
GAGCATTCCCAAAGGCAAAATTTCCATTGTAGAAGCATTGACACTTCTCAATAATCATAAGCTTTTTCCAGAAACCTGGA
CTGCTGAGAAAATAATGCAAGAATACCAGTTAGAACAGAAAGATGTGAATTCTCTTCTTAAATATTTTGTTACTTTTGAA
GTCGAAATCTTCCCTCCTGAAGACAAGAAAGCAATACGATCAAAATGA
ATGGGAGCACTAGTGATTCGCGGTATCAGGAATTTCAACCTAGAGAACCGAGCGGAACGGGAAATCAGCAAGATGAAGCC
CTCTGTCGCTCCCAGACACCCCTCTACCAACAGCCTCCTGCGAGAGCAGATTAGTCTCTATCCAGAAGTTAAAGGAGAGA
TTGCTTGTAAAGATGAAAAGCTGCTGTCGTTTCTAAAAGATGTGTATGTTGATTCCAAAGATCCTGTGTCTTCCTTGCAG
GTAAAAGCTGCTGAAACATGTCAAGAGCCGAAGGAATTCAGATTGCCAAAAGACCATCACTTTGATATGATAAATATTAA
GAGCATTCCCAAAGGCAAAATTTCCATTGTAGAAGCATTGACACTTCTCAATAATCATAAGCTTTTTCCAGAAACCTGGA
CTGCTGAGAAAATAATGCAAGAATACCAGTTAGAACAGAAAGATGTGAATTCTCTTCTTAAATATTTTGTTACTTTTGAA
GTCGAAATCTTCCCTCCTGAAGACAAGAAAGCAATACGATCAAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .93 RPM |
| SRP007412_cerebellum | 12 .12 RPM |
| SRP007412_heart | 15 .59 RPM |
| SRP007412_kidney | 10 .36 RPM |
| SRP007412_liver | 7 .46 RPM |
| SRP007412_testis | 4 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000003174 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005145 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001235 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000007618 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000123545 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012070 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000015734 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018843 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000028261 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013568 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002152 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016857 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000007506 | ortholog_one2many | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000010911 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_358 | 70.06 | 89.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1013 | 85.09 | 92.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1877 | 86.61 | 72.57 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2552 | 80.25 | 89.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000018435 retrocopies