Parental gene:

RPS20, ENSPCAG00000004300

Aliases:None
Description:ribosomal protein S20 [Source:HGNC Symbol;Acc:10405]
Organism:Hyrax (Procavia capensis)
Coordinates:scaffold_18466:19689..21004(-)


>ENSPCAG00000004300
ATGGCTTTTAAGGACACCGGAAAGACACCCGTGGAGCCAGAGGTAGCAATTCATCGGATTAGAATTACTCTAACCAGCCG
CAACGTAAAATCCTTGGAGAAGGTGTGTGCTGACTTGATTAGAGGTGCAAAGGAGAAAAACCTCAAAGTAAAGGGACCTG
TTAGGATGCCTACCAAGACTCTGAGAATCACTACGAGGAAAACGCCTTGTGGTGAAGGTTCTAAGACCTGGGATCGTTTC
CAAATGAGAATTCATAAGCGACTCATTGACTTGCACAGTCCTTCCGAGATTGTTAAGCAGATCACTTCCATCAGTATTGA
GCCTGGGGTTGAGGTGGAAGTCACCATTGCAGATGCTTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019147 ortholog_one2one 11 retrogenes
Canis familiaris ENSCAFG00000029884 ortholog_one2one 20 retrogenes
Callithrix jacchus ENSCJAG00000016631 ortholog_one2one 4 retrogenes
Dipodomys ordii ENSDORG00000005794 ortholog_one2one 2 retrogenes
Echinops telfairi ENSETEG00000003394 possible_ortholog 3 retrogenes
Felis catus ENSFCAG00000029233 ortholog_one2one 22 retrogenes
Homo sapiens ENSG00000008988 ortholog_one2one 26 retrogenes
Gorilla gorilla ENSGGOG00000001837 ortholog_one2one 21 retrogenes
Macropus eugenii ENSMEUG00000014171 ortholog_one2one 21 retrogenes
Monodelphis domestica ENSMODG00000009114 ortholog_one2one 6 retrogenes
Mustela putorius furo ENSMPUG00000010452 possible_ortholog 15 retrogenes
Mus musculus ENSMUSG00000028234 ortholog_one2one 7 retrogenes
Nomascus leucogenys ENSNLEG00000001214 possible_ortholog 19 retrogenes
Oryctolagus cuniculus ENSOCUG00000003068 ortholog_one2one 17 retrogenes
Otolemur garnettii ENSOGAG00000007760 ortholog_one2one 10 retrogenes
Ochotona princeps ENSOPRG00000011042 ortholog_one2one 11 retrogenes
Pongo abelii ENSPPYG00000018600 ortholog_one2one 30 retrogenes
Pan troglodytes ENSPTRG00000020264 ortholog_one2one 27 retrogenes
Rattus norvegicus ENSRNOG00000008555 ortholog_one2many 7 retrogenes
Sarcophilus harrisii ENSSHAG00000011200 ortholog_one2one 10 retrogenes
Sus scrofa ENSSSCG00000006249 ortholog_one2one 12 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_244 68.38 96.64
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_pcap_427 91.53 99.16
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_pcap_438 68.07 100.00
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSPCAG00000004300 retrocopies