RetrogeneDB ID: | retro_chof_1144 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_210971:22..452(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.75 % |
Parental protein coverage: | 91.14 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNV-GRSPDPRAVSCLRNHDS |
MA.Q.PK.VL.VCLG.IC.SPIAEA.F.K.VTDQNISD.W.I.....S.....G..PD.....CL..HD. | |
Retrocopy | MAEQEPKLVLLVCLGSICPSPIAEAIF*KPVTDQNISDHWKIVNATISTFEM<GNPPDYQGQNCLKKHDI |
Parental | NTAHKARQVTKEDFA-TFDYILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDPQKQLIIEDPYYGNDSD |
.....A.QVTKEDFA.TFDYI.CMDES.LRDLN.KG..VKN.KAKIELLG.YD.QKQ.IIEDPYY..DSD | |
Retrocopy | PLNCIAQQVTKEDFA<TFDYIPCMDESSLRDLNGKGKQVKNYKAKIELLGRYDSQKQVIIEDPYYESDSD |
Parental | FETVYQ |
FETVY. | |
Retrocopy | FETVYE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |