RetrogeneDB ID: | retro_chof_842 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_15477:5101..5582(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.42 % |
Parental protein coverage: | 99.37 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
MAAQ..K.VLFVCLGNIC.SP.AEAVFRKLVTDQ.ISDNW.IDS.A.S....G...D.....C...HD.. | |
Retrocopy | MAAQLSKLVLFVCLGNICQSPLAEAVFRKLVTDQHISDNWRIDSAATSTYEIGNTSDY*GQKCMKKHDIP |
Parental | TAHKARQVTKEDFATFDYILCMDESNLRDLNRK-GSAVK-NRKAKIELLGSYDPQKQLIIED-PYYGND- |
..H.A.QVTKE.FA.FDYILCMDESNL.......G..VK.....K.E.LG...PQ.QLIIE..PYYGND. | |
Retrocopy | MNHMAWQVTKEGFAIFDYILCMDESNLMRIGIEIGRDVKIPQSQKMEYLGGMIPQNQLIIES>PYYGND> |
Parental | SDFETVY-QQCVRCC-KAFLEKS |
SDFETVY.QQCVRC..KAFLEKS | |
Retrocopy | SDFETVY>QQCVRCL>KAFLEKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |