RetrogeneDB ID: | retro_etel_230 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_3918:133892..134296(+) | ||
Located in intron of: | ENSETEG00000009527 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013764 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.12 % |
Parental protein coverage: | 85.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAEQAPKSVLFVCLGNI-CRSPIAEAVFRKLVTDQNLLDKWIIDSGAVSDWNVGRSPDPRAVSYLGSHDI |
MAEQAPKSVL.VCLGN..CRSPIAEAVFRKL.T.QN..DKW..DS.A.S....G..PD............ | |
Retrocopy | MAEQAPKSVLLVCLGNT<CRSPIAEAVFRKLETVQNI*DKWRTDSAATSTHEIGNPPDCGGQNCMKKYGN |
Parental | NSAHKARQITKEDFATFDFILCMDESNLRDLTRKGNQVKNCKAKIELLGNYDPQKQVIIEDPYYGN |
...H.ARQITKEDFATFD.ILCM.ESNLRDLTRKGNQVKNCKAKIELLG....QKQ.I.EDPY.GN | |
Retrocopy | PMNHIARQITKEDFATFDYILCMNESNLRDLTRKGNQVKNCKAKIELLGSSESQKQLITEDPYDGN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |