RetrogeneDB ID: | retro_etel_1034 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_202598:4082..4396(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013764 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 52.83 % |
Parental protein coverage: | 66.46 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QAPKSVLFVCL-GNICRSPIAEAVFRKLVTDQNLLDKWIIDSGAVSDWNVGRSPDPRAVSYLGSHDINSA |
Q.......VCL.GNIC.S.I..AVFRK.VTDQNLLD.WII.S.A............R.........I... | |
Retrocopy | QSKPQIQAVCL<GNIC*SSIDKAVFRKPVTDQNLLDQWIINSAAAFTYETRSPHNHRGQNSMKKKGIPMN |
Parental | HKARQITKEDFATFDFILCMDESNLRDLTRKGNQVK |
H.A..IT.E.F.TFD..LCMDES.LRDLTRKG.QVK | |
Retrocopy | HVAQEITAEAFTTFDYRLCMDESYLRDLTRKGKQVK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |