RetrogeneDB ID: | retro_chof_2654 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_94555:2836..3235(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.42 % |
Parental protein coverage: | 84.18 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
MA.Q.PK.VLF.CLGN.C.SPIAEAVFRKLVTDQNISDNW.ID....S....G..PD.R...C...HD.. | |
Retrocopy | MAVQLPKLVLFLCLGNNC*SPIAEAVFRKLVTDQNISDNWRIDCATTSTYEIGNPPDYRGQNCMKKHDIP |
Parental | TAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDPQKQLIIEDPYY |
..H.....TKED.A.FD..LCM.ESN.RDLNRKGS.VKN.K.KIELLGSYDPQKQLIIEDPYY | |
Retrocopy | MNHVTWLFTKEDLAIFDCVLCMHESNPRDLNRKGSEVKNCKVKIELLGSYDPQKQLIIEDPYY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |