RetrogeneDB ID: | retro_mmur_1180 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_29590:113..736(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSMICG00000008024 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 63.21 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 4 |
Parental | MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRG-GNKKYRALRLDVGNFSWGS |
.GIS.DNWHK..K...KRKPYHKK.KYE.G.P.AN.KIGP..IHTV..R...NKKY.AL.LD.G.FSW.. | |
Retrocopy | IGISQDNWHKCPKIRVKRKPYHKKLKYESGHPTANIKIGPCHIHTVLCRE<SNKKYCALKLDMGKFSWAL |
Parental | ECCTRKTR-IIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILN |
..CT...R.I.DV...ASNNEL..TKTLVKNCI.L.DSTPY.Q.YESHY.LP.G..K.AKLTP.EEE... | |
Retrocopy | KWCT*RVR>ITDVCH-ASNNELACTKTLVKNCILLTDSTPY*Q*YESHYVLPFGHEKAAKLTPKEEEXXX |
Parental | KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRA-DGYVLEGKELEFYL-RKIKARK |
.......QKKYD.RK.NAK.S.LLEEQFQQGKL..C..SR..QCG.A.DGYVLE.K..EFY..RKI...K | |
Retrocopy | XXXXXXXQKKYDGRKNNAKTSKLLEEQFQQGKLFVCTTSRLRQCG*A>DGYVLEDKKQEFYM>RKIEVLK |
Parental | GK |
G. | |
Retrocopy | GQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |