Parental gene:

RPS8, ENSGGOG00000005645

Aliases:None
Description:40S ribosomal protein S8 [Source:UniProtKB/TrEMBL;Acc:G3QS94]
Organism:Gorilla (Gorilla gorilla)
Coordinates:1:46314348..46317522(+)


>ENSGGOG00000005645
ATGGGCATCTCTCGGGACAACTGGCACAAGCGCCGCAAAACCGGGGGCAAGAGAAAGCCCTACCACAAGAAGCGGAAGTA
TGAGTTGGGGCGCCCAGCTGCCAACACCAAGATTGGCCCCCGCCGCATCCACACAGTCCGTGTGCGGGGAGGTAACAAGA
AATACCGTGCCCTGAGGTTGGACGTGGGGAATTTCTCCTGGGGCTCAGAGTGTTGTACTCGTAAAACAAGGATCATCGAT
GTTGTCTACAATGCATCTAATAACGAGCTGGTTCGTACCAAGACCCTGGTGAAGAATTGCATCGTGCTCATCGACAGCAC
ACCGTACCGACAGTGGTACGAGTCCCACTATGCGCTGCCCCTGGGCCGCAAGAAGGGAGCCAAGCTGACTCCTGAGGAAG
AAGAGATTTTAAACAAAAAACGATCTAAAAAAATTCAGAAGAAATATGATGAAAGGAAAAAGAATGCCAAAATCAGCAGT
CTCCTGGAGGAGCAGTTCCAGCAGGGCAAGCTTCTTGCGTGCATCGCTTCAAGGCCAGGACAGTGTGGCCGAGCAGATGG
CTATGTGCTAGAGGGCAAAGAGTTGGAGTTCTATCTTAGGAAAATCAAGGCCCGCAAAGGCAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 155 .04 RPM
SRP007412_cerebellum 203 .26 RPM
SRP007412_heart 147 .25 RPM
SRP007412_kidney 379 .29 RPM
SRP007412_liver 438 .43 RPM
SRP007412_testis 284 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015697 ortholog_one2many 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000014147 possible_ortholog 3 retrogenes
Bos taurus ENSBTAG00000015285 possible_ortholog 2 retrogenes
Canis familiaris ENSCAFG00000004745 ortholog_one2one 8 retrogenes
Choloepus hoffmanni ENSCHOG00000008785 possible_ortholog 10 retrogenes
Callithrix jacchus ENSCJAG00000004197 possible_ortholog 5 retrogenes
Cavia porcellus ENSCPOG00000000723 possible_ortholog 3 retrogenes
Dasypus novemcinctus ENSDNOG00000025236 ortholog_one2one 3 retrogenes
Dipodomys ordii ENSDORG00000009287 possible_ortholog 1 retrogene
Echinops telfairi ENSETEG00000004002 possible_ortholog 13 retrogenes
Felis catus ENSFCAG00000022996 possible_ortholog 4 retrogenes
Homo sapiens ENSG00000142937 possible_ortholog 8 retrogenes
Loxodonta africana ENSLAFG00000027596 possible_ortholog 3 retrogenes
Macropus eugenii ENSMEUG00000001388 possible_ortholog 1 retrogene
Microcebus murinus ENSMICG00000008024 ortholog_one2one 4 retrogenes
Myotis lucifugus ENSMLUG00000001559 possible_ortholog 30 retrogenes
Macaca mulatta ENSMMUG00000015270 possible_ortholog 2 retrogenes
Monodelphis domestica ENSMODG00000028389 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000013485 possible_ortholog 6 retrogenes
Mus musculus ENSMUSG00000047675 possible_ortholog 33 retrogenes
Nomascus leucogenys ENSNLEG00000014147 possible_ortholog 1 retrogene
Oryctolagus cuniculus ENSOCUG00000012476 possible_ortholog 1 retrogene
Otolemur garnettii ENSOGAG00000006922 possible_ortholog 16 retrogenes
Pongo abelii ENSPPYG00000001426 possible_ortholog 1 retrogene
Pan troglodytes ENSPTRG00000000659 possible_ortholog 1 retrogene
Pteropus vampyrus ENSPVAG00000009859 possible_ortholog 10 retrogenes
Rattus norvegicus ENSRNOG00000018768 possible_ortholog 2 retrogenes
Sorex araneus ENSSARG00000000899 possible_ortholog 1 retrogene
Sarcophilus harrisii ENSSHAG00000000111 possible_ortholog 5 retrogenes
Sus scrofa ENSSSCG00000003930 possible_ortholog 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000006322 possible_ortholog 3 retrogenes
Tupaia belangeri ENSTBEG00000000418 possible_ortholog 20 retrogenes
Tarsius syrichta ENSTSYG00000005525 possible_ortholog 5 retrogenes
Tursiops truncatus ENSTTRG00000003388 possible_ortholog 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_556 84.69 100.00
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2. retro_ggor_1127 80.83 92.79
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3. retro_ggor_1170 87.50 100.00
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4. retro_ggor_1357 92.34 100.00
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5. retro_ggor_1465 79.67 58.65
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Download FASTA sequences of all ENSGGOG00000005645 retrocopies