RetrogeneDB ID: | retro_mluc_662 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429770:25174819..25175421(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000001559 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S8 [Source:UniProtKB/TrEMBL;Acc:G1NVW1] |
Percent Identity: | 56.81 % |
Parental protein coverage: | 99.04 % |
Number of stop codons detected: | 7 |
Number of frameshifts detected | 7 |
Parental | TGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRV-RGGNKKYRALRLDVG-NFSWG |
..IS.DN..K...T...RKPYH.K.K.E.....ANTKI.....H...V..G.N.K.RALRLD....FS.G | |
Retrocopy | SSIS*DN*RKHHRTRRNRKPYHTKQKCEMVHYTANTKIDLGQTHSPCV<VGVNIKCRALRLDAA<SFSQG |
Parental | SECCTRKTRII-DVV-YNASNNELVRTKTLVKNCIVLVDSTPYRQWY-ESHYALP-LGRKKGAKLTPEEE |
...C..K.RI..DVV...ASN.EL...KTL.KNC..L...TPY.Q.Y..S..ALP.LG.K.GAKLTPEEE | |
Retrocopy | ---CRSKARIV<DVV<LYASNSELAHAKTLLKNCNMLINNTPY*Q*Y<QSC*ALP<LGHKMGAKLTPEEE |
Parental | EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLAC-IASRPGQCGRADGYVLEGKELEFYLRKIK |
EILNK.RSK.IQKKYD..K.N...SS.LEE.FQQG.LLA....SRPGQC.R.DG.V..GK.L...LRKIK | |
Retrocopy | EILNKNRSKNIQKKYDGNKSNTQVSSFLEEHFQQGNLLAA<LTSRPGQCSRTDGNVR*GKKLGL*LRKIK |
Parental | ARK |
A.K | |
Retrocopy | AGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |