RetrogeneDB ID: | retro_mluc_2055 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430006:1618195..1618655(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000001559 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S8 [Source:UniProtKB/TrEMBL;Acc:G1NVW1] |
Percent Identity: | 67.3 % |
Parental protein coverage: | 74.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | LGRPAANT-KIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLV |
.G.PAANT....P....TV.V.GGN.KY.ALRLD.GNF.W..ECCT.KTR.ID.VYNASNNE..RTKTLV | |
Retrocopy | VGCPAANT>RLAPTA-YTVHVQGGNQKYHALRLDMGNFFWALECCTCKTRAIDIVYNASNNEVIRTKTLV |
Parental | KNCIVLVDSTPYRQWYE-SHYALPL-GRKKGA-KLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEE |
K.C..L.DST...Q.Y..S..AL.L.G.KKG..KL.PEEEEILNKK.SKK.QKKYDE....A.ISSLLEE | |
Retrocopy | KKCTMLTDSTSDEQRYD<SYHALAL<GLKKGT<KLIPEEEEILNKKQSKKTQKKYDEWENQATISSLLEE |
Parental | QFQQGKLLACIASRPGQCG |
.FQQGKLLACIASRP...G | |
Retrocopy | *FQQGKLLACIASRPMSLG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |