RetrogeneDB ID: | retro_mluc_906 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429782:295749..296271(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000001559 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S8 [Source:UniProtKB/TrEMBL;Acc:G1NVW1] |
Percent Identity: | 77.09 % |
Parental protein coverage: | 85.1 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSEC |
GI.R..WHKR.KTGG.R..YH.KRKYELGRPAA.TKIGPR.IHTV.V.GGNKKY.ALRLD.GNF.WGSE. | |
Retrocopy | GIPRVSWHKRFKTGGEREAYHEKRKYELGRPAASTKIGPRCIHTVHVWGGNKKYQALRLDRGNF-WGSEY |
Parental | CTRKTRIIDVVYNASN-NELVRTKTLVKNCIVLVDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKK |
.TRKTRIIDV....SN.N.LV..KTLVKNCIVL.DSTP..QW.ESH.ALP.G.KKGAKLT.EEEEIL.KK | |
Retrocopy | STRKTRIIDVYNASSN>N*LV--KTLVKNCIVLTDSTPH*QWCESHQALPWGHKKGAKLTTEEEEILDKK |
Parental | RSKKIQKKYDERKKNAKISSLLEEQFQQ-GKLLACIASR |
RSK.IQKKYDERKK.AKISSLL.EQ.QQ.GKLL..IASR | |
Retrocopy | RSKRIQKKYDERKKDAKISSLLKEQDQQ<GKLLS*IASR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |