RetrogeneDB ID: | retro_mputfur_1549 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897235.1:407111..407560(-) | ||
Located in intron of: | ENSMPUG00000013502 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PSMA3 | ||
Ensembl ID: | ENSMPUG00000006126 | ||
Aliases: | None | ||
Description: | proteasome (prosome, macropain) subunit, alpha type, 3 [Source:HGNC Symbol;Acc:9532] |
Percent Identity: | 76.32 % |
Parental protein coverage: | 59.22 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNV |
.SS.G.GY.L.ASTF.PDGRVFQV.YA.KAV.NSS.AIGIRCKDGV.FGVEKLVLS.LY..GSN..LFNV | |
Retrocopy | VSSVGAGYKL*ASTFCPDGRVFQVVYAIKAV-NSSIAIGIRCKDGVIFGVEKLVLSQLYKKGSNE*LFNV |
Parental | DRHV-GMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLG |
.R...GM..A.LLADA.SLADIARE.ASNFRSNFG.N.PL..LADRVAMY.H.YTLYSAVRPFG....LG | |
Retrocopy | GRLL<GMTLADLLADAYSLADIAREAASNFRSNFGHNFPLQCLADRVAMYIHTYTLYSAVRPFGSVYILG |
Parental | SYSVNDGAQLYM |
SYSVNDGAQLY. | |
Retrocopy | SYSVNDGAQLYI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |