RetrogeneDB ID: | retro_mputfur_414 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896908.1:5839364..5839775(+) | ||
Located in intron of: | ENSMPUG00000000990 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PSMA3 | ||
Ensembl ID: | ENSMPUG00000006126 | ||
Aliases: | None | ||
Description: | proteasome (prosome, macropain) subunit, alpha type, 3 [Source:HGNC Symbol;Acc:9532] |
Percent Identity: | 89.78 % |
Parental protein coverage: | 53.73 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | YVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCR |
Y..AYTLYSAV.PFGCSFMLGSYSVNDGAQLYMI.P.GVS.GYWGCAIGKARQAAKTEIEKLQMKEMTC. | |
Retrocopy | YSAAYTLYSAV*PFGCSFMLGSYSVNDGAQLYMIGPLGVSHGYWGCAIGKARQAAKTEIEKLQMKEMTCS |
Parental | DVVKEVAKIIYIVHDEVKDKAFELELSWVGEITKGRHEIVPKDIKEEAEKYAKESLKEEDESDDDNM |
D.VKEVAKIIYIVHDEVKDKAFEL.LSWVGEI.K.RHEIVPKDIKEEAEKYAKE.LKE.DESDDD.M | |
Retrocopy | DIVKEVAKIIYIVHDEVKDKAFELDLSWVGEISKRRHEIVPKDIKEEAEKYAKEPLKE*DESDDDIM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |