RetrogeneDB ID: | retro_pvam_682 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_671:41507..41922(+) | ||
Located in intron of: | ENSPVAG00000003805 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PIGP | ||
Ensembl ID: | ENSPVAG00000000857 | ||
Aliases: | None | ||
Description: | phosphatidylinositol glycan anchor biosynthesis, class P [Source:HGNC Symbol;Acc:3046] |
Percent Identity: | 85.92 % |
Parental protein coverage: | 89.17 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | RLSKATGKMVENSPSPLPE-RAIYGFVLFLSSQFGFMLYLVWAFIPESWLNSLGLTYWPQKYWAVALPVY |
RLS..TGKM.ENSPSPLP..RAIYGF.LFLSSQ.GF.LYL.WAFIPE.WLNSLGL.YWPQKY.AVA.PVY | |
Retrocopy | RLSRNTGKM-ENSPSPLPD<RAIYGFALFLSSQYGFILYLIWAFIPEFWLNSLGLSYWPQKYQAVAFPVY |
Parental | LLITVVIGYVLLFGINMMSTSPLNSIHTITDNYAKN-QQQKKYQEEAIPALRDISISEVNQMFFLAANEL |
LLIT.VIGY.LLFGINMMSTSPLNSIHTITDNYAKN.Q.QKKYQEEAIPALRDISISE.NQMFFL.A.EL | |
Retrocopy | LLITIVIGYILLFGINMMSTSPLNSIHTITDNYAKN<Q*QKKYQEEAIPALRDISISEINQMFFLVAQEL |
Parental | YT |
YT | |
Retrocopy | YT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |