RetrogeneDB ID: | retro_ttru_1043 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_100894:81608..82026(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PIGP | ||
Ensembl ID: | ENSTTRG00000007711 | ||
Aliases: | None | ||
Description: | phosphatidylinositol glycan anchor biosynthesis, class P [Source:HGNC Symbol;Acc:3046] |
Percent Identity: | 60.84 % |
Parental protein coverage: | 91.56 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | RLSKDTGKMVENSPSPLPERAIYGFV-LFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPVY |
RLS..T.K.VE.SP.P.PERAIYG...L.LSSQF...LYL.W.FIPESWLN.LGLTYWPQKY.AVALPVY | |
Retrocopy | RLSTATEKVVEKSPLPFPERAIYGLL<LLLSSQFWCTLYLMWPFIPESWLNTLGLTYWPQKYQAVALPVY |
Parental | LLITAVIGYVLLFVXXXXXXXXXXXXXXXXXNYAKNQQPKKYQEEAI-PALRDIPISEVNQMFFLKAKEL |
L..T..I.Y..LF..................N.AKNQQ.KKYQ.EAI..AL.DI.ISE.N..F.L..KEL | |
Retrocopy | LITTIAIRYIVLFGINMMSTSPLNSIHVITDNDAKNQQQKKYQ-EAI<LALEDISISEIN*IFLLATKEL |
Parental | YTK |
YTK | |
Retrocopy | YTK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |