Parental gene: | PIGP, ENSFCAG00000028400 |
| Aliases: | None |
| Description: | phosphatidylinositol glycan anchor biosynthesis, class P [Source:HGNC Symbol;Acc:3046] |
| Organism: | Cat (Felis catus) |
| Coordinates: | C2:8469668..8482338(+) |
>ENSFCAG00000028400
ATGATTGTGTTTCTTTCCCACAGATTGTCCAAAGCCACAGGGAAAATGGTGGAAAATTCACCGTCGCCATTACCAGAAAG
AGCGATTTATGGCTTTGTTCTTTTCTTAAGCTCCCAGTTTGGCTTCATACTATATCTTGTGTGGGCTTTTATTCCTGAAA
CTTGGCTAAACTCCTTAGGCTTAACCTACTGGCCTCAAAAGTATTGGGCAATTGCATTGCCCGTCTACCTCCTCATTACT
ATAGTAATCGGTTATGTACTCTTGTTTGGAATAAACATGATGAGTACCTCTCCACTCAACTCCATTCATACGATCACAGA
TAACTATGCTAAAAATCAACAGCGGAAGAATTACCAAGAAGAGGCCATCCCGGCATTAAGAGATATTCCTATTAGTGAAG
TAAACCAAATGTTCTTTCTTGCAGCCAAAGAACATCACACCCAAAACTAA
ATGATTGTGTTTCTTTCCCACAGATTGTCCAAAGCCACAGGGAAAATGGTGGAAAATTCACCGTCGCCATTACCAGAAAG
AGCGATTTATGGCTTTGTTCTTTTCTTAAGCTCCCAGTTTGGCTTCATACTATATCTTGTGTGGGCTTTTATTCCTGAAA
CTTGGCTAAACTCCTTAGGCTTAACCTACTGGCCTCAAAAGTATTGGGCAATTGCATTGCCCGTCTACCTCCTCATTACT
ATAGTAATCGGTTATGTACTCTTGTTTGGAATAAACATGATGAGTACCTCTCCACTCAACTCCATTCATACGATCACAGA
TAACTATGCTAAAAATCAACAGCGGAAGAATTACCAAGAAGAGGCCATCCCGGCATTAAGAGATATTCCTATTAGTGAAG
TAAACCAAATGTTCTTTCTTGCAGCCAAAGAACATCACACCCAAAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .78 RPM |
| SRP017611_kidney | 12 .99 RPM |
| SRP017611_brain | 13 .31 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000009702 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000002683 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000007156 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000019349 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000185808 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010275 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000016211 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000020988 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000008312 | ortholog_one2one | 5 retrogenes | |
| Mus musculus | ENSMUSG00000022940 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004523 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000022451 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011097 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011409 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000013897 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000000857 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000014284 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012061 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010943 | ortholog_one2one | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009899 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007711 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_181 | 79.45 | 97.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_729 | 75.76 | 65.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_1269 | 72.50 | 53.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_fcat_1286 | 78.38 | 73.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_fcat_1408 | 69.72 | 94.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_fcat_1495 | 68.92 | 96.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_fcat_1671 | 72.22 | 69.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_fcat_1859 | 68.46 | 97.99 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000028400 retrocopies