RetrogeneDB ID: | retro_shar_334 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL841374.1:72123..72501(-) | ||
Located in intron of: | ENSSHAG00000000912 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSHAG00000000731 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.42 % |
Parental protein coverage: | 77.58 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 5 |
Parental | MLMP-KKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQS-LKSRGYVKEQFAWRHFY |
MLMP.KKN...IYELL.KE.VMV.KKDVH.PK.PELADKNV..LHVMKA..S...S.GYV.EQFAWRHF. | |
Retrocopy | MLMP<KKN*VVIYELLLKERVMVDKKDVHVPKRPELADKNVSRLHVMKARHS>VMSPGYVTEQFAWRHFS |
Parental | WYLTNEGI-QYLRDYLHL-PPEIVPATLRRSRPETG-RPRPKGLEGERPARLTRGEADRDTYR |
WYLTNE.I....RDYLHL.PP.IV.ATL.RS.PETG.R....GLEG.....LT.GE.DRDTY. | |
Retrocopy | WYLTNEAI<SCFRDYLHL<PPKIVFATLYRS-PETG<REQSPGLEGGHSSWLTQGEPDRDTYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |