RetrogeneDB ID: | retro_tbel_3542 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_144225:2866..3177(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EEF1B2 | ||
Ensembl ID: | ENSTBEG00000005657 | ||
Aliases: | None | ||
Description: | eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:3208] |
Percent Identity: | 83.81 % |
Parental protein coverage: | 52.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | YVPSQ-ADVAVFEAVSGPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKYGPANVEDTTGSGAPESK |
YVPSQ.ADVAVFEAVS.P.PA.LCHALRW..HIKSYEK.K.SLPGV.KALGKYG.ANVEDTTGSGAPESK | |
Retrocopy | YVPSQ<ADVAVFEAVSSPLPANLCHALRW*SHIKSYEKKKSSLPGVMKALGKYGSANVEDTTGSGAPESK |
Parental | DDDDDIDLFGSDDEEESEEAKRLREERLAQYESKK |
D.DDDIDLFG...EEESEEA.RLREE.LAQYE.KK | |
Retrocopy | DIDDDIDLFGFHEEEESEEAERLREEHLAQYELKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |