RetrogeneDB ID: | retro_shar_208 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL834662.1:1650939..1651277(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSHAG00000017853 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.39 % |
Parental protein coverage: | 51.85 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KQKASLPGKKKALSKYGPADVEDTTGSGGATDS-KDDDDIDLFGSDDEEESEEAKKLREERLAQYESKK- |
KQKASLP...K.L.KYGPA..E.TTGS.GAT.S..D..D.DLF.S...EESEE..K.REE..AQ.ESK.. | |
Retrocopy | KQKASLP-RIKVLGKYGPANIEGTTGSNGATGS>LDSNDSDLFASNGDEESEEVEKHREECFAQHESKTF |
Parental | SKKPAIVAKSSLLLDVKP-WDDETDMAKLEECVRSIQADGLVWGS |
S........SSLL...KP.W..E.D..KLEEC..S.QAD.LVWG. | |
Retrocopy | SFNSMQLLLSSLLTG*KP>WKNEADIEKLEECIKSFQADSLVWGN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |