RetrogeneDB ID: | retro_mluc_1167 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429803:261967..262626(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000025190 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000016602 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.12 % |
Parental protein coverage: | 98.67 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MGFGDLRSPSGLQVLNNYLADKSY-IEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEKEKASL |
.GFG.L..P.GLQVLN.YL......IEG.VPS.ADVAVFEAVSG.PPAD..H...WYNH.KSY...KASL | |
Retrocopy | IGFGGLNRPTGLQVLNDYLRPRARSIEGSVPSHADVAVFEAVSGLPPADVYHPPCWYNH-KSY---KASL |
Parental | PGVKKALGKYGPANVEDTTGSGAGDSKDDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVA |
PGVKKAL..YGPA.VE.TTGSGA.D.K.DDD.IDL.GSD.EEESEE.KRLRE..L.Q.ESKKA.KPALVA | |
Retrocopy | PGVKKALDEYGPADVEATTGSGATDTKGDDD-IDLSGSDEEEESEEGKRLREGQLGQHESKKARKPALVA |
Parental | KSSILLDVKPWDDETDMAKLEECVRSIQADGLVW-GSSKLVPVGYGIK-KLQI-QCVVEDDKVGT-DMLE |
KSSILLDVK..DDE..MAKLEE.VRSIQAD.LVW.GSS.LV.VG.GI..KLQI..CV.EDDKVG..DMLE | |
Retrocopy | KSSILLDVKLGDDEMEMAKLEERVRSIQADCLVW<GSSTLVLVGCGIL>KLQI>SCVTEDDKVGN>DMLE |
Parental | EQITAFEDYVQSMDVAAF |
E.ITAFEDYVQS.DVAAF | |
Retrocopy | EWITAFEDYVQSVDVAAF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |