Parental gene: | EEF1B2, ENSPPYG00000013107 |
| Aliases: | None |
| Description: | eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:3208] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2b:97677200..97680229(+) |
>ENSPPYG00000013107
ATGGGTTTCGGAGACCTGAAAAGCCCCGCCGGCCTCCAGGTGCTCAACGATTACCTGGCGGACAAGAGCTACATCGAGGG
GTATGTGCCATCACAAGCAGATGTGGCAGTATTTGAAGCCGTGTCCGGCCCACCGCCTGCCGACTTGTGTCATGCCCTAC
GTTGGTATAATCACATCAAGTCTTACGAAAAGGAAAAGGCCAGCCTGCCAGGAGTGAAGAAAGCTTTGGGCAAGTATGGT
CCTGCCGATGTGGAAGACACTACAGGAAGTGGAGCTACAGATAGTAAAGATGATGATGACATTGACCTCTTTGGATCTGA
TGATGAGGAGGAAAGTGAAGAAGCAAAGAGGCTAAGGGAAGAACGTCTTGCACAATATGAATCAAAGAAAGCCAAAAAAC
CTGCACTTGTTGCCAAGTCTTCCATTTTACTAGATGTGAAACCTTGGGATGATGAGACAGATATGGCAAAATTAGAGGAG
TGCGTCAGAAGCATTCAAGCAGATGGCTTAGTCTGGGGCTCATCTAAACTAGTTCCAGTGGGATACGGAATTAAGAAACT
TCAAATACAGTGTGTAGTCGAAGATGATAAAGTTGGAACAGATATGCTGGAGGAGCAGATCACTGCTTTTGAGGACTATG
TGCAGTCCATGGATGTGGCTGCTTTCAACAAGATCTAA
ATGGGTTTCGGAGACCTGAAAAGCCCCGCCGGCCTCCAGGTGCTCAACGATTACCTGGCGGACAAGAGCTACATCGAGGG
GTATGTGCCATCACAAGCAGATGTGGCAGTATTTGAAGCCGTGTCCGGCCCACCGCCTGCCGACTTGTGTCATGCCCTAC
GTTGGTATAATCACATCAAGTCTTACGAAAAGGAAAAGGCCAGCCTGCCAGGAGTGAAGAAAGCTTTGGGCAAGTATGGT
CCTGCCGATGTGGAAGACACTACAGGAAGTGGAGCTACAGATAGTAAAGATGATGATGACATTGACCTCTTTGGATCTGA
TGATGAGGAGGAAAGTGAAGAAGCAAAGAGGCTAAGGGAAGAACGTCTTGCACAATATGAATCAAAGAAAGCCAAAAAAC
CTGCACTTGTTGCCAAGTCTTCCATTTTACTAGATGTGAAACCTTGGGATGATGAGACAGATATGGCAAAATTAGAGGAG
TGCGTCAGAAGCATTCAAGCAGATGGCTTAGTCTGGGGCTCATCTAAACTAGTTCCAGTGGGATACGGAATTAAGAAACT
TCAAATACAGTGTGTAGTCGAAGATGATAAAGTTGGAACAGATATGCTGGAGGAGCAGATCACTGCTTTTGAGGACTATG
TGCAGTCCATGGATGTGGCTGCTTTCAACAAGATCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 68 .23 RPM |
| SRP007412_cerebellum | 64 .45 RPM |
| SRP007412_heart | 103 .13 RPM |
| SRP007412_kidney | 128 .28 RPM |
| SRP007412_liver | 234 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003015 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000021979 | ortholog_one2many | 8 retrogenes | |
| Canis familiaris | ENSCAFG00000029635 | ortholog_many2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013835 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005805 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000014496 | possible_ortholog | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000003669 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000010239 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000114942 | ortholog_one2one | 9 retrogenes | |
| Gorilla gorilla | ENSGGOG00000007002 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000002654 | ortholog_one2many | 8 retrogenes | |
| Microcebus murinus | ENSMICG00000010607 | ortholog_one2many | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016602 | possible_ortholog | 8 retrogenes | |
| Macaca mulatta | ENSMMUG00000001054 | ortholog_one2one | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000007098 | ortholog_one2one | 8 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009848 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011229 | ortholog_one2many | 3 retrogenes | |
| Oreochromis niloticus | ENSONIG00000017630 | ortholog_many2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000017163 | possible_ortholog | 3 retrogenes | |
| Oryzias latipes | ENSORLG00000018533 | ortholog_many2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000013348 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017334 | ortholog_one2many | 2 retrogenes | |
| Sorex araneus | ENSSARG00000001524 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000017853 | ortholog_many2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000016128 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005437 | ortholog_many2many | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000005657 | ortholog_one2many | 13 retrogenes | |
| Xiphophorus maculatus | ENSXMAG00000006050 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1251 | 92.44 | 99.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1656 | 92.42 | 58.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2163 | 85.38 | 57.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2389 | 75.48 | 68.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2419 | 76.13 | 68.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_2746 | 92.82 | 92.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_2876 | 70.99 | 71.56 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000013107 retrocopies