RetrogeneDB ID: | retro_tsyr_1253 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_3650:10810..11071(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSTSYG00000001781 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 62.07 % |
Parental protein coverage: | 74.36 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQ |
..LY..K.GK...SACG.CPGRL.GV.A...KVL.RL.....H..RAYG.SM......DRIK.AFLI..Q | |
Retrocopy | LHLYATKAGKDTDSACGMCPGRL*GVHAGGTKVLTRLXXXXXHNHRAYGESMRVTRACDRIKLAFLIKVQ |
Parental | KIVVKVLKAQAQSQKAK |
KIVVK.LKAQAQSQKAK | |
Retrocopy | KIVVKELKAQAQSQKAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |