RetrogeneDB ID: | retro_tsyr_1425 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_43566:11536..11779(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSTSYG00000001781 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 62.96 % |
Parental protein coverage: | 69.23 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | RLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYG |
.LS.NTA..K.RLS..PG.RI..LYT.KVGK.PKSAC..CPGR..G..AVRP.V.MRL.......SRA.G | |
Retrocopy | QLSCNTAYSKARLS*APGYRII*LYTEKVGKVPKSACVMCPGRC*GFCAVRPEVFMRLXXXXXXNSRASG |
Parental | GSMCAKCVRDR |
G.MCA.CVRDR | |
Retrocopy | GPMCATCVRDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |