RetrogeneDB ID: | retro_tsyr_49 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_1297:49765..50116(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSTSYG00000001781 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 94.87 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKT |
M.QRLTYR.RLSYNTASNKTRLSR.PGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAV.PKVLMRLSKT | |
Retrocopy | MIQRLTYRHRLSYNTASNKTRLSRMPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVKPKVLMRLSKT |
Parental | KKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQKAK |
KKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKI.VKVLKAQAQSQKA. | |
Retrocopy | KKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIIVKVLKAQAQSQKAE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |