RetrogeneDB ID: | retro_tsyr_211 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_5298:44280..44632(+) | ||
Located in intron of: | ENSTSYG00000012668 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSTSYG00000001781 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 88.14 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKV-GKAPKSACGVCPGRLRGVRAVRPKVLMRLSK |
MVQ.LTY.RRLSYNTASNKTRLSRTPGNRIVYLYTK.V.GK.PKSACG.CPGRLRGV.AVRPKVLMRLSK | |
Retrocopy | MVQYLTYHRRLSYNTASNKTRLSRTPGNRIVYLYTKEV>GKTPKSACGMCPGRLRGVCAVRPKVLMRLSK |
Parental | TKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQKAK |
TKKHVS.AYGGS.CAKCVRDRIK.AF.IE.QKIV.KVLKAQAQSQK.K | |
Retrocopy | TKKHVSQAYGGSTCAKCVRDRIKCAFFIEKQKIVMKVLKAQAQSQKEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |