RetrogeneDB ID: | retro_chof_2561 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_86457:3824..4182(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000002166 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G3 | ||
Ensembl ID: | ENSCHOG00000012592 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) [Source:HGNC Symbol;Acc:843] |
Percent Identity: | 80.49 % |
Parental protein coverage: | 85.82 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | VYRPISASVLSQPENRT-GKGSTVFNRAQNGVSQLIQREF-QTSVISRDIDTAAKFIGAGAATVGVAGSG |
..R.ISA.VLSQPE.R..G.GSTVF..AQ.GVS.LIQREF..TSVI.RD.D.AAK...AGAATVGVAGSG | |
Retrocopy | LHRLISALVLSQPEDRM<GEGSTVFSWAQDGVSKLIQREF<STSVINRDTDLAAKCV-AGAATVGVAGSG |
Parental | AGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
AG.GTVFGS.IIGY.RNPSLKQQLFSYAILGFALSE.MGLFCLMVAFLILFAM | |
Retrocopy | AGVGTVFGSRIIGYGRNPSLKQQLFSYAILGFALSEDMGLFCLMVAFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |