Parental gene: | ENSMODG00000009520 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 4:186294354..186297521(-) |
>ENSMODG00000009520
ATGTTCGCCTGCGCCAAGCTCGCCTGCTCCCCGGCGCTGATCCGTGCTGGATCCAGAATTGTATACAGACCAATTTCTGC
AGCAGTGTTGTCTCGACCAGAGGTCAGGACTGGAGAGGGCAACACAGTATCTAATGGGGCCCAGAACAGGGTGTCTCAGC
TAGCACTAAGGGAGTTCCAGACCAGTGCTATCAGCAGAGACGTTGATACTGCTGCCAAATTTATTGGTGCAGGTGCTGCC
ACAGTAGGAGTGGCTGGTTCTGGTGCTGGTATTGGAACTGTCTTTGGTTCTCTCATTATTGGTTATGCCAGAAACCCCTC
ACTGAAGCAGCAGCTGTTCTCATATGCTATCCTGGGATTCGCCTTGTCTGAAGCTATGGGTCTCTTTTGTTTGATGGTTG
CTTTCTTGATCTTGTTTGCCCTGTAA
ATGTTCGCCTGCGCCAAGCTCGCCTGCTCCCCGGCGCTGATCCGTGCTGGATCCAGAATTGTATACAGACCAATTTCTGC
AGCAGTGTTGTCTCGACCAGAGGTCAGGACTGGAGAGGGCAACACAGTATCTAATGGGGCCCAGAACAGGGTGTCTCAGC
TAGCACTAAGGGAGTTCCAGACCAGTGCTATCAGCAGAGACGTTGATACTGCTGCCAAATTTATTGGTGCAGGTGCTGCC
ACAGTAGGAGTGGCTGGTTCTGGTGCTGGTATTGGAACTGTCTTTGGTTCTCTCATTATTGGTTATGCCAGAAACCCCTC
ACTGAAGCAGCAGCTGTTCTCATATGCTATCCTGGGATTCGCCTTGTCTGAAGCTATGGGTCTCTTTTGTTTGATGGTTG
CTTTCTTGATCTTGTTTGCCCTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012367 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000002944 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000013366 | ortholog_many2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000012592 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008207 | ortholog_many2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000006194 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010440 | ortholog_one2many | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000010768 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012822 | ortholog_many2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003954 | ortholog_many2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013986 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012164 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000027578 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001596 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000006733 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013572 | ortholog_one2many | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000012159 | ortholog_many2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011524 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_295 | 93.48 | 97.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_545 | 85.82 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1070 | 87.38 | 73.05 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000009520 retrocopies