Parental gene:

ATP5G3, ENSOCUG00000012164

Aliases:None
Description:ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) [Source:HGNC Symbol;Acc:843]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:7:114819413..114826542(-)


>ENSOCUG00000012164
ATGTTCGCCTGCGCCAAGCTCGCCTGCACCCCTGCTCTGATCCGAGCTGGATCCAGAGTCGCATACAGACCAATCTCTGC
ATCAGTGTTGTCCCGACCAGAGGCCAGGACTGGAGAGGGCTCTACGGTATTTAATGGGGCCCAGAATGGTGTGTCTCAAC
TTATCCGAAGGGAGTTTCAGACCAGTGCGATCAGCAGAGACATTGATACTGCTGCCAAATTTATTGGTGCAGGTGCTGCA
ACAGTAGGAGTGGCTGGTTCTGGTGCTGGTATTGGAACAGTTTTTGGCAGCCTCATCATTGGTTATGCCAGAAACCCTTC
GCTGAAGCAGCAGCTGTTCTCATATGCTATCCTGGGATTTGCCTTGTCTGAAGCTATGGGTCTCTTTTGTTTGATGGTTG
CTTTCTTGATTTTGTTTGCCATGTAA

Library Parental gene expression (RPM)
SRP017611_liver 82 .78 RPM
SRP017611_kidney 374 .92 RPM
SRP017611_brain 180 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012367 ortholog_one2one 1 retrogene
retro_amel_1829,
Canis familiaris ENSCAFG00000013366 ortholog_one2one 2 retrogenes
retro_cfam_4, retro_cfam_5,
Choloepus hoffmanni ENSCHOG00000012592 ortholog_one2one 3 retrogenes
retro_chof_189, retro_chof_2561, retro_chof_508,
Callithrix jacchus ENSCJAG00000008207 possible_ortholog 3 retrogenes
retro_cjac_279, retro_cjac_38, retro_cjac_4183,
Cavia porcellus ENSCPOG00000006194 ortholog_one2one 1 retrogene
retro_cpor_479,
Dasypus novemcinctus ENSDNOG00000010440 ortholog_one2one 2 retrogenes
retro_dnov_235, retro_dnov_396,
Loxodonta africana ENSLAFG00000010768 ortholog_one2one 1 retrogene
retro_lafr_120,
Myotis lucifugus ENSMLUG00000012822 ortholog_one2many 1 retrogene
retro_mluc_23,
Macaca mulatta ENSMMUG00000003954 ortholog_one2many 1 retrogene
retro_mmul_148,
Monodelphis domestica ENSMODG00000009520 ortholog_one2many 3 retrogenes
retro_mdom_1070, retro_mdom_295, retro_mdom_545,
Mustela putorius furo ENSMPUG00000013986 ortholog_one2one 1 retrogene
retro_mputfur_818,
Oryctolagus cuniculus ENSOCUG00000008933 within_species_paralog 4 retrogenes
retro_ocun_1933, retro_ocun_450, retro_ocun_762, retro_ocun_794,
Oryctolagus cuniculus ENSOCUG00000016225 within_species_paralog 2 retrogenes
retro_ocun_346, retro_ocun_375,
Otolemur garnettii ENSOGAG00000027578 ortholog_one2one 1 retrogene
retro_ogar_1938,
Rattus norvegicus ENSRNOG00000001596 ortholog_one2one 1 retrogene
retro_rnor_1106,
Sorex araneus ENSSARG00000006733 ortholog_one2one 1 retrogene
retro_sara_82,
Ictidomys tridecemlineatus ENSSTOG00000013572 ortholog_one2one 4 retrogenes
retro_itri_1091, retro_itri_1236, retro_itri_324, retro_itri_438,
Tupaia belangeri ENSTBEG00000012159 ortholog_one2many 1 retrogene
retro_tbel_54,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_949 96.45 99.29
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Download FASTA sequences of all ENSOCUG00000012164 retrocopies