Parental gene:

ATP5G3, ENSCAFG00000013366

Aliases:LOC478807, ATP5G3
Description:ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) [Source:HGNC Symbol;Acc:843]
Organism:Dog (Canis familiaris)
Coordinates:36:19131328..19134035(-)


>ENSCAFG00000013366
ATGTTGGCCTGCGCCAAGCTCGCCTGCGCCCCCGCTCTGATCCGAGCTGGATCCAGAGTTGCATACAGACCAATTTCTGC
ATCAGTGTTATATCGACCAGAGGCTAGGCCTGGAGAGCGCTCTACGGTATTTAATGGGGCCCAGAATGGTGTGTCTCAGC
GAATCCAAAGGGAGTTTCAGACCAGTGCAATCAGCAGAGACATTGATACTGCTGCCAAATTTATTGGTGCAGGTGCTGCA
ACAGTGGGAGTGGCTGGTTCTGGTGCTGGTATTGGAACAGTCTTTGGCAGCCTTATCATTGGTTATGCCAGAAACCCTTC
GCTGAAGCAGCAGCTGTTTTCATATGCTATCCTGGGATTTGCCTTGTCTGAAGCTATGGGTCTCTTTTGTTTGATGGTTG
CTTTCTTGATCTTGTTTGCCATGTAA

Library Parental gene expression (RPM)
SRP017611_brain 80 .50 RPM
SRP017611_kidney 358 .32 RPM
SRP017611_liver 79 .47 RPM
SRP012049_cerebellum 133 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012367 ortholog_one2one 1 retrogene
retro_amel_1829,
Bos taurus ENSBTAG00000002944 possible_ortholog 1 retrogene
retro_btau_838,
Canis familiaris ENSCAFG00000016880 within_species_paralog 5 retrogenes
retro_cfam_1583, retro_cfam_1621, retro_cfam_1882, retro_cfam_336, retro_cfam_647,
Choloepus hoffmanni ENSCHOG00000012592 ortholog_one2many 3 retrogenes
retro_chof_189, retro_chof_2561, retro_chof_508,
Callithrix jacchus ENSCJAG00000008207 possible_ortholog 3 retrogenes
retro_cjac_279, retro_cjac_38, retro_cjac_4183,
Cavia porcellus ENSCPOG00000006194 ortholog_one2one 1 retrogene
retro_cpor_479,
Dasypus novemcinctus ENSDNOG00000010440 ortholog_one2many 2 retrogenes
retro_dnov_235, retro_dnov_396,
Loxodonta africana ENSLAFG00000010768 ortholog_one2one 1 retrogene
retro_lafr_120,
Myotis lucifugus ENSMLUG00000012822 ortholog_one2many 1 retrogene
retro_mluc_23,
Macaca mulatta ENSMMUG00000003954 ortholog_one2many 1 retrogene
retro_mmul_148,
Monodelphis domestica ENSMODG00000009520 ortholog_many2many 3 retrogenes
retro_mdom_1070, retro_mdom_295, retro_mdom_545,
Mustela putorius furo ENSMPUG00000013986 ortholog_one2one 1 retrogene
retro_mputfur_818,
Oryctolagus cuniculus ENSOCUG00000012164 ortholog_one2one 1 retrogene
retro_ocun_949,
Otolemur garnettii ENSOGAG00000027578 ortholog_one2one 1 retrogene
retro_ogar_1938,
Rattus norvegicus ENSRNOG00000001596 ortholog_one2one 1 retrogene
retro_rnor_1106,
Sorex araneus ENSSARG00000006733 ortholog_one2one 1 retrogene
retro_sara_82,
Ictidomys tridecemlineatus ENSSTOG00000013572 ortholog_one2one 4 retrogenes
retro_itri_1091, retro_itri_1236, retro_itri_324, retro_itri_438,
Tupaia belangeri ENSTBEG00000012159 ortholog_many2many 1 retrogene
retro_tbel_54,
Tursiops truncatus ENSTTRG00000011524 possible_ortholog 3 retrogenes
retro_ttru_268, retro_ttru_510, retro_ttru_588,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_4 88.65 100.00
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2. retro_cfam_5 71.94 98.58
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Download FASTA sequences of all ENSCAFG00000013366 retrocopies