Parental gene:

MMU.3119, ENSMMUG00000003954

Aliases:None
Description:ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) [Source:RefSeq peptide;Acc:NP_001185663]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:12:38832526..38835806(-)


>ENSMMUG00000003954
ATGTTCGCCTGCGCCAAGCTCGCCTGCACGCCCGCTCTGATCCGAGCTGGATCCAGAGTTGCATACAGACCAATTTCTGC
ATCAGTGTTATCTCGACCAGAGGCTAGGACTGGAGAGGGCTCTACGGTATTTAATGGGGCCCAGAATGGTGTGTCTCAGC
TAATCCAAAGGGAGTTTCAGACCAGTGCAATCAGCAGAGACATTGATACTGCTGCCAAATTTATTGGTGCAGGTGCTGCA
ACAGTAGGAGTGGCTGGTTCTGGTGCTGGTATTGGAACAGTCTTTGGCAGCCTTATCATTGGTTATGCCAGAAACCCTTC
GCTGAAGCAGCAGCTGTTCTCATATGCTATCCTGGGATTTGCCTTGTCTGAAGCTATGGGTCTCTTTTGTTTGATGGTTG
CTTTCTTGATTTTGTTTGCCATGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 75 .68 RPM
SRP007412_brain 18 .94 RPM
SRP007412_cerebellum 17 .56 RPM
SRP007412_heart 96 .16 RPM
SRP007412_kidney 46 .71 RPM
SRP007412_liver 53 .72 RPM
SRP007412_testis 4 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012367 ortholog_one2many 1 retrogene
retro_amel_1829,
Bos taurus ENSBTAG00000002944 possible_ortholog 1 retrogene
retro_btau_838,
Canis familiaris ENSCAFG00000013366 ortholog_one2many 2 retrogenes
retro_cfam_4, retro_cfam_5,
Choloepus hoffmanni ENSCHOG00000012592 ortholog_one2many 3 retrogenes
retro_chof_189, retro_chof_2561, retro_chof_508,
Callithrix jacchus ENSCJAG00000008207 possible_ortholog 3 retrogenes
retro_cjac_279, retro_cjac_38, retro_cjac_4183,
Cavia porcellus ENSCPOG00000006194 ortholog_one2many 1 retrogene
retro_cpor_479,
Dasypus novemcinctus ENSDNOG00000010440 ortholog_one2many 2 retrogenes
retro_dnov_235, retro_dnov_396,
Loxodonta africana ENSLAFG00000010768 ortholog_one2many 1 retrogene
retro_lafr_120,
Myotis lucifugus ENSMLUG00000012822 ortholog_many2many 1 retrogene
retro_mluc_23,
Macaca mulatta ENSMMUG00000013395 within_species_paralog 1 retrogene
retro_mmul_173,
Macaca mulatta ENSMMUG00000016241 within_species_paralog 3 retrogenes
retro_mmul_1539, retro_mmul_2173, retro_mmul_439,
Monodelphis domestica ENSMODG00000009520 ortholog_many2many 3 retrogenes
retro_mdom_1070, retro_mdom_295, retro_mdom_545,
Mustela putorius furo ENSMPUG00000013986 ortholog_one2many 1 retrogene
retro_mputfur_818,
Oryctolagus cuniculus ENSOCUG00000012164 ortholog_one2many 1 retrogene
retro_ocun_949,
Otolemur garnettii ENSOGAG00000027578 ortholog_one2many 1 retrogene
retro_ogar_1938,
Rattus norvegicus ENSRNOG00000001596 ortholog_one2many 1 retrogene
retro_rnor_1106,
Sorex araneus ENSSARG00000006733 ortholog_one2many 1 retrogene
retro_sara_82,
Ictidomys tridecemlineatus ENSSTOG00000013572 ortholog_one2many 4 retrogenes
retro_itri_1091, retro_itri_1236, retro_itri_324, retro_itri_438,
Tupaia belangeri ENSTBEG00000012159 ortholog_many2many 1 retrogene
retro_tbel_54,
Tursiops truncatus ENSTTRG00000011524 possible_ortholog 3 retrogenes
retro_ttru_268, retro_ttru_510, retro_ttru_588,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_148 100.00 100.00
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Download FASTA sequences of all ENSMMUG00000003954 retrocopies