RetrogeneDB ID: | retro_dord_162 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_4126:91182..91490(-) | ||
Located in intron of: | ENSDORG00000010223 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Hspe1 | ||
Ensembl ID: | ENSDORG00000011071 | ||
Aliases: | None | ||
Description: | heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680] |
Percent Identity: | 94.23 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAGQAFRKFMPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPV-SVK-VG |
MAGQAFRKF.PLFDRVLVERS.AETVTKGGIMLPE.SQGKVLQATVVAVGSGSKG.GGEIQPV.SVK.VG | |
Retrocopy | MAGQAFRKFIPLFDRVLVERSTAETVTKGGIMLPERSQGKVLQATVVAVGSGSKGEGGEIQPV>SVK>VG |
Parental | DKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVE |
DKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVE | |
Retrocopy | DKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |