RetrogeneDB ID: | retro_dord_153 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_3985:48261..48483(-) | ||
Located in intron of: | ENSDORG00000015270 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Hspe1 | ||
Ensembl ID: | ENSDORG00000011071 | ||
Aliases: | None | ||
Description: | heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680] |
Percent Identity: | 78.38 % |
Parental protein coverage: | 70.59 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | TKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDY--FLFRDG |
.K.GIMLPEKSQGKVLQATV.A.G.GSKGKG.EIQPVS.KVGDKVLLPE.GGTKVVLDDKDY..F..R.. | |
Retrocopy | SKEGIMLPEKSQGKVLQATVMAMGLGSKGKGEEIQPVSEKVGDKVLLPECGGTKVVLDDKDYLSFFIREA |
Parental | DILG |
..LG | |
Retrocopy | TLLG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |