Parental gene:

Hspe1, ENSDORG00000011071

Aliases:None
Description:heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_3601:9847..11239(+)


>ENSDORG00000011071
ATGGCCGGACAAGCATTTAGGAAGTTCATGCCTCTGTTTGACCGAGTGCTGGTCGAAAGGAGTGCAGCTGAAACTGTGAC
CAAAGGAGGCATTATGCTTCCAGAAAAGTCTCAAGGAAAAGTATTGCAAGCCACAGTAGTGGCTGTGGGATCGGGCTCTA
AAGGAAAGGGTGGAGAGATTCAGCCAGTTAGTGTGAAAGTGGGTGATAAAGTTCTTCTCCCAGAATATGGAGGCACCAAA
GTAGTTCTAGATGACAAGGATTATTTCTTATTTAGGGATGGTGACATTCTTGGGAAGTATGTAGAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013769 ortholog_one2one 18 retrogenes
retro_amel_1027, retro_amel_1083, retro_amel_1084, retro_amel_1100, retro_amel_133, retro_amel_1504, retro_amel_1513, retro_amel_1623, retro_amel_1699, retro_amel_1819, retro_amel_199, retro_amel_23, retro_amel_269, retro_amel_310, retro_amel_329, retro_amel_491, retro_amel_506, retro_amel_922,
Bos taurus ENSBTAG00000012589 ortholog_one2one 4 retrogenes
retro_btau_1118, retro_btau_624, retro_btau_760, retro_btau_801,
Cavia porcellus ENSCPOG00000027474 ortholog_one2one 3 retrogenes
retro_cpor_1431, retro_cpor_273, retro_cpor_649,
Dasypus novemcinctus ENSDNOG00000013246 ortholog_one2one 27 retrogenes
retro_dnov_1088, retro_dnov_1117, retro_dnov_1214, retro_dnov_1375, retro_dnov_1391, retro_dnov_1405, retro_dnov_1412, retro_dnov_1428, retro_dnov_1445, retro_dnov_1546, retro_dnov_1647, retro_dnov_1652, retro_dnov_1686, retro_dnov_1821, retro_dnov_2176, retro_dnov_2291, retro_dnov_2413, retro_dnov_2569, retro_dnov_2625, retro_dnov_2652, retro_dnov_418, retro_dnov_481, retro_dnov_483, retro_dnov_490, retro_dnov_524, retro_dnov_554, retro_dnov_966,
Loxodonta africana ENSLAFG00000000057 ortholog_one2one 1 retrogene
retro_lafr_69,
Otolemur garnettii ENSOGAG00000034434 possible_ortholog 24 retrogenes
retro_ogar_1018, retro_ogar_1441, retro_ogar_1512, retro_ogar_1690, retro_ogar_1744, retro_ogar_1899, retro_ogar_191, retro_ogar_1921, retro_ogar_200, retro_ogar_2030, retro_ogar_2129, retro_ogar_2310, retro_ogar_235, retro_ogar_2439, retro_ogar_2636, retro_ogar_2928, retro_ogar_3088, retro_ogar_3350, retro_ogar_3419, retro_ogar_389, retro_ogar_777, retro_ogar_824, retro_ogar_829, retro_ogar_834,
Rattus norvegicus ENSRNOG00000014868 possible_ortholog 6 retrogenes
retro_rnor_1094, retro_rnor_1320, retro_rnor_1334, retro_rnor_2245, retro_rnor_2296, retro_rnor_984,
Vicugna pacos ENSVPAG00000005805 ortholog_one2one 8 retrogenes
retro_vpac_173, retro_vpac_209, retro_vpac_292, retro_vpac_299, retro_vpac_329, retro_vpac_410, retro_vpac_443, retro_vpac_46,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_153 78.38 70.59
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2. retro_dord_158 77.27 85.29
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3. retro_dord_162 94.23 100.00
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4. retro_dord_191 88.46 100.00
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5. retro_dord_207 97.06 100.00
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6. retro_dord_216 82.89 73.53
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7. retro_dord_219 99.02 100.00
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8. retro_dord_296 64.41 56.86
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9. retro_dord_368 89.13 89.22
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10. retro_dord_403 99.02 100.00
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11. retro_dord_417 100.00 100.00
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12. retro_dord_462 98.04 100.00
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13. retro_dord_492 95.10 100.00
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14. retro_dord_525 83.33 82.35
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15. retro_dord_535 91.18 100.00
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16. retro_dord_583 83.33 82.35
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17. retro_dord_740 95.51 87.25
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18. retro_dord_744 90.20 100.00
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19. retro_dord_755 89.58 94.12
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Download FASTA sequences of all ENSDORG00000011071 retrocopies