RetrogeneDB ID: | retro_dord_368 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_14361:28142..28414(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Hspe1 | ||
Ensembl ID: | ENSDORG00000011071 | ||
Aliases: | None | ||
Description: | heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680] |
Percent Identity: | 89.13 % |
Parental protein coverage: | 89.22 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LFDRVLVERSAAETVTKGGI-MLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTK |
L..RVLVERSAAE.VTKGGI.MLPEKSQ.KV.QATVV.VG.GSKGKGGEIQPVSVKVGDKVLLPEYGGTK | |
Retrocopy | LLGRVLVERSAAEIVTKGGI<MLPEKSQEKVVQATVVTVGLGSKGKGGEIQPVSVKVGDKVLLPEYGGTK |
Parental | VVLDDKDYFLFRDGDILGKYVE |
VVLDDKDYFLFRDGDILGK..E | |
Retrocopy | VVLDDKDYFLFRDGDILGKELE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |