RetrogeneDB ID: | retro_lafr_873 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_42:14424368..14424646(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSLAFG00000009349 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.28 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCII-GFDEYMNL-VLDDAEEIHSKT |
.AY.GQ.QK.QKV..QP..LI.RYLQ..S.IQVWL.EQVN.R.E.C.I..FDE.MNL...DDAEEIHSKT | |
Retrocopy | IAYHGQSQKMQKVIMQPTTLICRYLQSGSWIQVWLQEQVNIRVEDCVI<RFDECMNLGAEDDAEEIHSKT |
Parental | KSRKQLGRIMLKGDNITLLQSVSN |
.SRK.LG.IM.KGDNITLLQSVSN | |
Retrocopy | TSRKELGWIMIKGDNITLLQSVSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |