Parental gene:

SNRPE, ENSMLUG00000013244

Aliases:None
Description:small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161]
Organism:Microbat (Myotis lucifugus)
Coordinates:GL429957:2642443..2648192(+)


>ENSMLUG00000013244
ATGGCGTACCGTGGCCAGGGCCAAAAGGTGCAGAAGGTGATGGTGCAGCCCATCAACCTCATCTTCAGATACTTGCAAAA
TAGATCTCGGATTCAGGTGTGGCTTTATGAGCAAGTGAATATGCGGATAGAAGGTTGTATCATTGGTTTTGATGAGTACA
TGAACCTCGTATTAGATGATGCAGAAGAGATTCATTCGAAAACAAAGTCAAGAAAACAACTAGGCCGGATCATGCTGAAA
GGAGATAATATTACCCTGCTCCAAAGTGTCTCCACCTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000882 ortholog_one2one 8 retrogenes
retro_amel_1112, retro_amel_1206, retro_amel_1211, retro_amel_1293, retro_amel_1517, retro_amel_1530, retro_amel_185, retro_amel_412,
Callithrix jacchus ENSCJAG00000006735 possible_ortholog 1 retrogene
retro_cjac_3163,
Dasypus novemcinctus ENSDNOG00000004490 possible_ortholog 24 retrogenes
retro_dnov_1009, retro_dnov_1141, retro_dnov_122, retro_dnov_1223, retro_dnov_1312, retro_dnov_1314, retro_dnov_1362, retro_dnov_1438, retro_dnov_163, retro_dnov_191, retro_dnov_2398, retro_dnov_2671, retro_dnov_360, retro_dnov_414, retro_dnov_513, retro_dnov_579, retro_dnov_796, retro_dnov_828, retro_dnov_898, retro_dnov_900, retro_dnov_902, retro_dnov_93, retro_dnov_967, retro_dnov_983,
Erinaceus europaeus ENSEEUG00000006187 possible_ortholog 6 retrogenes
retro_eeur_339, retro_eeur_497, retro_eeur_579, retro_eeur_613, retro_eeur_85, retro_eeur_92,
Echinops telfairi ENSETEG00000014015 possible_ortholog 24 retrogenes
retro_etel_1136, retro_etel_1244, retro_etel_138, retro_etel_1443, retro_etel_1530, retro_etel_1636, retro_etel_1739, retro_etel_1781, retro_etel_1947, retro_etel_2143, retro_etel_234, retro_etel_258, retro_etel_310, retro_etel_377, retro_etel_466, retro_etel_546, retro_etel_56, retro_etel_579, retro_etel_581, retro_etel_582, retro_etel_76, retro_etel_776, retro_etel_799, retro_etel_80,
Gorilla gorilla ENSGGOG00000000755 possible_ortholog 7 retrogenes
retro_ggor_1462, retro_ggor_1626, retro_ggor_1700, retro_ggor_2221, retro_ggor_228, retro_ggor_2892, retro_ggor_91,
Loxodonta africana ENSLAFG00000009349 possible_ortholog 3 retrogenes
retro_lafr_796, retro_lafr_814, retro_lafr_873,
Macropus eugenii ENSMEUG00000015262 possible_ortholog 1 retrogene
retro_meug_378,
Macaca mulatta ENSMMUG00000031372 possible_ortholog 8 retrogenes
retro_mmul_1039, retro_mmul_1258, retro_mmul_1576, retro_mmul_1790, retro_mmul_1820, retro_mmul_2054, retro_mmul_2480, retro_mmul_427,
Monodelphis domestica ENSMODG00000028394 ortholog_one2one 3 retrogenes
retro_mdom_1164, retro_mdom_1790, retro_mdom_1865,
Mustela putorius furo ENSMPUG00000011642 possible_ortholog 7 retrogenes
retro_mputfur_1078, retro_mputfur_1527, retro_mputfur_1634, retro_mputfur_53, retro_mputfur_638, retro_mputfur_729, retro_mputfur_949,
Mus musculus ENSMUSG00000090553 ortholog_one2one 10 retrogenes
retro_mmus_1527, retro_mmus_1597, retro_mmus_1704, retro_mmus_2090, retro_mmus_2788, retro_mmus_2953, retro_mmus_296, retro_mmus_3001, retro_mmus_3682, retro_mmus_898,
Otolemur garnettii ENSOGAG00000004309 possible_ortholog 12 retrogenes
retro_ogar_2249, retro_ogar_2543, retro_ogar_2619, retro_ogar_2917, retro_ogar_3031, retro_ogar_3279, retro_ogar_748, retro_ogar_749, retro_ogar_750, retro_ogar_773, retro_ogar_774, retro_ogar_947,
Ochotona princeps ENSOPRG00000015415 possible_ortholog 11 retrogenes
retro_opri_120, retro_opri_1215, retro_opri_314, retro_opri_359, retro_opri_450, retro_opri_453, retro_opri_580, retro_opri_601, retro_opri_613, retro_opri_786, retro_opri_856,
Pongo abelii ENSPPYG00000000326 possible_ortholog 8 retrogenes
retro_pabe_1375, retro_pabe_20, retro_pabe_2023, retro_pabe_228, retro_pabe_3015, retro_pabe_3620, retro_pabe_56, retro_pabe_610,
Sorex araneus ENSSARG00000003311 possible_ortholog 9 retrogenes
retro_sara_171, retro_sara_173, retro_sara_183, retro_sara_214, retro_sara_219, retro_sara_37, retro_sara_664, retro_sara_697, retro_sara_750,
Sarcophilus harrisii ENSSHAG00000002978 possible_ortholog 1 retrogene
retro_shar_357,
Sus scrofa ENSSSCG00000023562 possible_ortholog 3 retrogenes
retro_sscr_1159, retro_sscr_172, retro_sscr_606,
Vicugna pacos ENSVPAG00000011162 possible_ortholog 2 retrogenes
retro_vpac_469, retro_vpac_477,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_85 98.72 84.78
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2. retro_mluc_919 89.06 69.57
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3. retro_mluc_1639 84.62 98.91
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4. retro_mluc_1650 74.29 76.09
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5. retro_mluc_1994 72.09 92.39
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6. retro_mluc_2045 84.85 70.65
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7. retro_mluc_2088 72.41 93.48
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8. retro_mluc_2326 98.91 100.00
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Download FASTA sequences of all ENSMLUG00000013244 retrocopies