RetrogeneDB ID: | retro_mluc_1994 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429980:1278548..1278798(-) | ||
Located in intron of: | ENSMLUG00000013546 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSMLUG00000013244 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 72.09 % |
Parental protein coverage: | 92.39 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | GQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCI-IGFDEYMNLVLDDAEEIHSKTKSRKQLG |
GQK.Q.VMVQPINLIFRY.Q.RS.IQV.L.EQ..MRIE.C..IG.D.Y.NL.LDD.E..HSKTKS.KQLG | |
Retrocopy | GQKLQ-VMVQPINLIFRYFQTRSQIQV*LHEQDYMRIE-CY>IGYDAYVNLILDDTEDTHSKTKSGKQLG |
Parental | RIMLKGDNITLLQSVS |
.IMLKG.NITLL..VS | |
Retrocopy | WIMLKGVNITLLRRVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |